VWXYNot? Comment(s) of the week:
SB for "One caveat to “open science” that is seldom discussed is the importance of achieving intra-group consensus on this issue (and the consequent difficulty it poses to individuals wishing to adopt this model in practice, even if they fully back it in principle); I wouldn’t dream of posting any of my findings online because they rely heavily on other group members’ unpublished data.
[...]
Also, my gut feeling is that people who are most heavily invested into their projects have the least to lose from posting the data online before submitting to a journal; if your experiments take years to do, it is very unlikely that someone could replicate them before you submit yours for publication…"
Beth Snow for "My first few papers from my PhD are under my former (i.e., ex-husband’s) surname, with more recent papers under my maiden name (i.e., the one I currently go by). I put a note on my publication list that older papers were published under a former surname, and it’s not been a problem for people reading my CV. Without the note, however, people could not figure out why I had “M.E. Simpson” underlined for the older papers and “M.E. Snow” underlined for the more recent ones. I thought it would be pretty obvious, but honestly, people were totally flummoxed without the explanation."
Massimo for "I am so jealous, I wish I could change my name too, and then tell everyone that my h-index is actually twice as much as it is, it is just that I have been publishing under different names…"
CromerCrox for "Modesty is an overrated virtue. Publication entitles you to a certain amount of self-congratulation."
Elizabeth for "I got married about 6 months after receiving my PhD in 2010 and changed my last name to my husbands (which I also consider an upgrade, went from 6 letters to 9, there’s a very cool looking family crest associated with the name in Norway, and I’m the only one with my new name in Pubmed that I can find so far). "
Bean-Mom for "It can feel strange to still publish when you’re not still at the bench, no? When I held a science writing/editing job somewhat similar to yours, I was offered authorship on a manuscript that I worked very hard on. It was so disorganized that I basically had to rewrite it from scratch–including giving advice on experimental design, figures, etc. It was a really weird position to be in; I’d been hired as a writer, not a postdoc or staff scientist, so it felt odd giving scientific input. But everyone was appreciative, particularly the Very Busy Supervisor who was too busy to supervise. When they offered me authorship on that paper, I turned it down as I didn’t feel I’d quite met the standard for authorship, but also because I thought it was an awful manuscript (even after all my help) and I didn’t want to be associated with it!
And the review that I worked on in that particular lab, which I thought I really did deserve authorship on? Not only did I not get authorship–they forgot to acknowledge me!
C’est la vie. New lab now, working at the bench and writing for myself. Okay, this comment has gone on too long. I just remember how odd it felt to be in that position, and to realize that you can still publish even when you’re not at the bench. (I guess no PIs are actually at the bench, and they all publish!)"
and Frank Norman for "Always good to see your name up in lights.
Maybe you could have put both names (CA Dunn and CA Ennis) on? ;-) "
Post(s) of the Week: The Excitable Scientist for "(Im)perfect role models" (on "the lack of correlation between having pleasant interactions with somebody, and that person’s ability to influence your life in a positive way")
and Massimo for "An ordinary Sunday evening" (buying train tickets in Italy is apparently much less straightforward - but much more hilarious - than in normal other countries)
Archives:
October 2008 - March 2009; April 2009 - September 2009; October 2009 - March 2010; April 2010 - September 2010; October 2010 - February 2011; March 2011 - September 2011; October 2011 - March 2012; April 2012 - September 2012
Just before I left, my postdoc lab was doing some work with bladder tissue. They determined that rat bladders were too small to be inverted and used for tests so they contacted a local slaughterhouse for a supply of fresh pig bladders. Two of the research team had to go early in the morning to collect the supply, armed with jars of buffer solutions and boxes of ice to keep the tissue viable. Once they got back to the lab, work had to start immediately, and almost as immediately there was the loudest shrieking screaming laughter I’d ever heard. I don’t know if it was similar logic to your monkey bum, or because they were both females, but the good folks at the slaughter house had very kindly left the very well endowed pig penis still attached to the bladder.
I made sure I was working else where on subsequent bladder days.
BWAHAHAHAHAHAHAHA!
That is excellent XD
I have never had a truly disgusting science experience. Sure a few bad smells (and dead marine things STINK like nothing else), but nothing that has made me even come close to vomiting, say.
The one thing that comes to mind, though, was a dissection on a big spanner crab. I was trying to get out the nerve cord, which I’d done in quite a few different crabs and crayfish and such. But this animal was big, and the inside had way more muscle and convolutions of the exoskeleton for muscle attachment, and a heavier exoskeleton, than anything else I’d ever worked with.
I lost all my technique cutting through all that, and was almost reduced to random hacking. I felt like a butcher.
Ah yes, I had a similar experience the first time I ate lobster. However, four lobster dinners in one week later (hey, we were in Nova Scotia), I was getting quite good at it!
I have fortunately missed out on all such ickiness. But the lab I did my PhD in also did alpha-1-antitrypsin assays as a service. One source of such things is, you guessed it, fecal tissue. We didn’t process those samples, but hearing the technician say “NO! We DON’T DO THAT!!” on the phone from time to time was always good fun.
Another postdoc in the lab had, in her previous lab, prepared sheared human placental DNA. From a nice fresh placenta from the nearby hospital. Now *that* tips my ick sensor into the red.
Too many to list, but the one that keeps coming to haunt me is the urine specimen I had to process when working in a hospital lab during my pre-grad school years … the specimen was dark green and had things crawling in it … if it hadn’t been labeled as a urine sample, I would have thought it was pond scum.
I’ve said it before and I’ll say iy again – I’m sooo glad I studied paleontology. However, one day the zoology museum in Cambridge (where I was a grad student) took delivery of a rhino carcass that had to be dismembered. Anyone who opened the zoo museum chest freezer for some time afterwards was confronted with four legs sticking up, one at each corner.
Mine doesn’t involve whole animals but rather pots of pig blood that I had to leave for a week at room temp so I could study the effects of natural lysis on the serum proteins (basically check that if our lab got a bad sample – could we still use our assays on it – supervisors idea). I ended up doing it over the easter break and even storing them in a fume hood – managed to stink out the entire lab. I discovered that not only does blood really smell, it turns a multitude of colours which I took photos of and eventually when I started retching, had to throw the whole lot in an autoclave before disposing of. Even worse, my supervisor then decided that it was useful but wasn’t worth doing anything else with – 2 months later at a conference – we saw a poster describing a similar experiment but they had wimped out at 3 days!
Ah Bob the Botfly – the thing that made me remember yet again why I love the cold climate countries
As for my ickfactor; maybe the necropsy time and the moose on the table was green and white… and that’s when I realised that the white things were moving (maggots) and the green was… ehh… rotten meat… That was a millisecond before the smell hit me. … needless to say, no food for a bit.
Then there is that fascination (as least for me) to see a skilled DVM (or probably a butcher could do it too) “slice up” a horse with a fillet knife in order to make it fit into the biohazard bags to be autoclaved so others didn’t get infected. I guess it’s the knowledge of where all the muscles connect and bones are so you really don’t need that much more than a wickedly sharp knife? But it’s not gross per se? Or I’m just desensitized?
Now, the slicing the head of the mice to look at the “nose part” and see how infected they are …. I’m happy I never had to do that… it was stressful enough to look at it being done.
Chall just reminded me – we do forensic science and the final year students doing dissertations (literature based, no experimental work). There are always a couple on forensic etomology – the order bugs go to corpses, the life cycles of maggots etc. I once made the mistake of reading a draft for a student first thing in the morning, straight after breakfast, straight before a staff meeting. I spent most of the meeting trying not to throw up. I’ve seen a few talks on this from folks that work at the Tennessee facility (known as the body farm). The pictures in those talks, maggots crawling all over male genitalia, right after lunch? (actually looked like the body was sandy until you looked really closely) That cleared a few folks out of the room pretty swiftly! [apparently the flys like orifices to lay their eggs in, any orifice...]
yeah… there is that… “(actually looked like the body was sandy until you looked really closely)” – my mistake that green/white time as well as my first autopsy… I turned white when I realised what I was looking at since I really didn’t think too much about it at first. Ah, to be a naive undergraduate again
Sadly, I managed to almost outdo myself a year and half later, when sitting on the patio of an expensive restaurant, I got bit by a spider. What little biology I’ve taken allowed me to confirm the identity of a wolf spider, and thus making me feel ok…until that night when I started to swell around the site. Being a microbiologist, I was able to see the hallmarks of a lovely S. aureus infection and swiftly got myself to the hospital, with a swelling about 5 inches in diameter – and was immediately put on some massive doses of antibiotics. The weird thing? it was the other leg, SAME SPOT. A good friend told me shortly thereafter that “I shouldn’t let insects try and get fresh with me”.
Oh, and as for nasty samples – a friend of mine in grad school has the short-sightedness to work on Giardia, then be surprised that his project involved PCR from fecal samples. He used to joke that if someone had a banana, he had a “shitty day” (banana’s high level of potassium can inactivate the PCR reaction in some cases).
You didn’t turn into Spiderman, then?
This is a great collection of stories… although not one that should be read anywhere near meal times!
Ricardipus, one of the other postdocs in my old lab was working on placental DNA, prepared from fresh samples. I didn’t envy her her project (on non-baboon days, anyway), but I’d actually say that placentas are less gross than some other human organs!
PiT, that’s horrifying! Were the “things” crawling in the sample just bacteria, or are we talking macroscopic? (pre-emptive shudder). And do you remember what condition that poor person had?!
Henry, I don’t think a frozen rhino quite holds up to some of these other stories, but it must have been quite the sight!
Abigail, welcome to the blog! That pig blood story sounds just awful! It sounds like you might have come up with the worst-smelling story… at least someone got some meaningful data out of it though, I guess!
Chall, maggots are my Room 101 critter, for sure. I have very little tolerance for even the thought of them… yuck! I’m glad I never had to do necropsies (or animal work of any kind!) – you’re clearly made of sterner stuff than I am!
KJ, my old lab once intereviewed a postdoctoral candidate who was working on something similar to that for her PhD… something about the effects of anti-depressant drugs on the rate of colonisation by insects. We took her out for lunch without the boss, so she could ask us questions about the lab… but instead, we spent most of our time in fascinated grossness, asking her questions about her work!
She didn’t end up working with us, but I can’t remember why!
Kyrsten, I’d forgotten about your subsequent spider escapades! You really did have a bad couple of years with the creepy crawlies there…
I’m thinking that an upcoming vote-for-the-grossest contest may be in order!
I think the geeks are beating the cancer patients!
I’ll post a link to this on my blog and see if a few more cancer patients want to weigh in with their disgusting stories.
My father was a vet, and I used to help him with surgery sometimes (at the age of 12 or so), so I don’t get grossed out by live animals being cut open, but some of these stories made me very glad I became a writer rather than a research scientist.
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